The following 2 datasets were derived from the APD database. AMPs in the database were shown to inhibit against gram+ and gram- bacteria
Positive_training_set (1500)Positive_testing_set (139)
The following 6 datasets are negative datasets that were used to train and test the model. The datasets are short sequences that do not contain AMP characteristics.
Negative training set (1500), NOAMP1Negative testing set (139), NOAMP1
Negative training set (1500), NOAMP2
Negative testing set (139), NOAMP2
Negative training set (1500), NOAMP3
Negative testing set (139), NOAMP3
The following 2 datasets are peptides from the Citrus genome that were predicted positive and negative by AGRAMP and these datasets were used
for the comparison with other AMP prediction models.
Testing dataset (200), AGRAMP AMP
Testing dataset (200), AGRAMP NOAMP
The dataset of 500 Citrus genome peptides that were predicted positive by AGRAMP
AGRAMP_AMP